Table 1 FDR adjusted p-values of significant epistatic effects detected under the full mode with the model selection between two loci located on different chromosomes in the analysis of the CEPH family data
From: Detecting epistatic interactions contributing to human gene expression using the CEPH family data
| Gene (location) | SNP1 (location) | SNP2 (location) | a1a2 | a1d2 | d1a2 | d1d2 |
|---|---|---|---|---|---|---|
| ITGB1BP1 (2p25.1) | rs1505694 (2p25.2) | rs1537638 (6p21.1) | 0.0291 a | 0.0092 | 1 | 0.3725 |
| TM7SF3 (12p11.23) |
rs575030 11q23.3 |
rs725291 11q24.2 | 1 | 1 | 0.0341 | 0.0387 |
|
rs725291 11q24.2 |
rs1944819 11q24.2 | 0.0351 | 1 | 0.0341 | 1 | |
|
rs725291 11q24.2 |
rs674237 11q24.2 | 0.0800 | 1 | 0.0341 | 1 | |
|
rs753013 12p11.22 |
rs1492332 12q12 | 1 | 1 | 0.0341 | 0.4308 | |
| PPAT (4q12) | rs1824965 (4q12) | rs39068 (7p15.1) | 1 | 1 | 0.1377 | 0.0351 |