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Volume 5 Supplement 2

Selected Proceedings of the 6th International Symposium on Bioinformatics Research and Applications (ISBRA;10)

Proceedings

Edited by Ion Mandoiu, J Peter Gogarten and Alex Zelikovsky

6th International Symposium on Bioinformatics Research and Applications (ISBRA;10). Go to conference site.

Storrs, CT, USA23-26 May 2010

  1. Plants have played a special role in inositol polyphosphate (IP) research since in plant seeds was discovered the first IP, the fully phosphorylated inositol ring of phytic acid (IP6). It is now known that phy...

    Authors: Fabio Fassetti, Ofelia Leone, Luigi Palopoli, Simona E Rombo and Adolfo Saiardi

    Citation: BMC Proceedings 2011 5(Suppl 2):S1

    Content type: Proceedings

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  2. Predicting new non-coding RNAs (ncRNAs) of a family can be done by aligning the potential candidate with a member of the family with known sequence and secondary structure. Existing tools either only consider ...

    Authors: Thomas King-Fung Wong, Brenda Wing-Yan Cheung, Tak-Wah Lam and Siu-Ming Yiu

    Citation: BMC Proceedings 2011 5(Suppl 2):S2

    Content type: Proceedings

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  3. The gene networks underlying closure of the optic fissure during vertebrate eye development are not well-understood. We use a novel clustering method based on nonlinear dimension reduction with data labeling t...

    Authors: Martin Ehler, Vinodh N Rajapakse, Barry R Zeeberg, Brian P Brooks, Jacob Brown, Wojciech Czaja and Robert F Bonner

    Citation: BMC Proceedings 2011 5(Suppl 2):S3

    Content type: Proceedings

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  5. A popular model for gene regulatory networks is the Boolean network model. In this paper, we propose an algorithm to perform an analysis of gene regulatory interactions using the Boolean network model and time...

    Authors: Carlos HA Higa, Vitor HP Louzada, Tales P Andrade and Ronaldo F Hashimoto

    Citation: BMC Proceedings 2011 5(Suppl 2):S5

    Content type: Proceedings

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  6. Genetic disease studies investigate relationships between changes in chromosomes and genetic diseases. Single haplotypes provide useful information for these studies but extracting single haplotypes directly b...

    Authors: Duong D Doan and Patricia A Evans

    Citation: BMC Proceedings 2011 5(Suppl 2):S6

    Content type: Proceedings

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  7. Many genome projects were underway before the advent of high-throughput sequencing and have thus been supported by a wealth of genome information from other technologies. Such information frequently takes the ...

    Authors: Thomas N Heider, James Lindsay, Chenwei Wang, Rachel J O’Neill and Andrew J Pask

    Citation: BMC Proceedings 2011 5(Suppl 2):S7

    Content type: Proceedings

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  8. The binding events of DNA-interacting proteins and their patterns can be extensively characterized by high density ChIP-chip tiling array data. The characteristics of the binding events could be different for ...

    Authors: Juntao Li, Lei Zhu, Majid Eshaghi, Jianhua Liu and Krishna Murthy R Karuturi

    Citation: BMC Proceedings 2011 5(Suppl 2):S8

    Content type: Proceedings

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  10. In principle, gene expression data can be viewed as providing just the three-valued expression profiles of target biological elements relative to an experiment at hand. Although complicated, gathering expressi...

    Authors: Hasan Jamil and Aminul Islam

    Citation: BMC Proceedings 2011 5(Suppl 2):S10

    Content type: Proceedings

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  11. The assignment of DNA samples to coarse population groups can be a useful but difficult task. One such example is the inference of coarse ethnic groupings for forensic applications. Ethnicity plays an importan...

    Authors: Chih Lee, Ion I Măndoiu and Craig E Nelson

    Citation: BMC Proceedings 2011 5(Suppl 2):S11

    Content type: Proceedings

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